Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Gm2445-201ENSMUST00000182798 989 ntBASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Smco3Q8BQM7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Gm12882-201ENSMUST00000121696 517 ntBASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smco3Q8BQM7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms