Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.83□□□□□ -0.36
Rnf220Q6PDX6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf220Q6PDX6 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Gm5177-201ENSMUST00000183092 997 ntBASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf220Q6PDX6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf220Q6PDX6 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms