Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Krt39Q6IFX4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Krt39Q6IFX4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Gm15920-201ENSMUST00000118998 402 ntBASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Gm13385-201ENSMUST00000121089 220 ntBASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Krt39Q6IFX4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Mir6956-201ENSMUST00000183598 62 ntBASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Gm27533-201ENSMUST00000183800 152 ntBASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Gm44872-201ENSMUST00000207864 420 ntBASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.97□□□□□ -0.01
Krt39Q6IFX4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Gm8410-201ENSMUST00000117225 605 ntBASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Krt39Q6IFX4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms