Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ecm1Q61508 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ecm1Q61508 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.89□□□□□ -0.03
Ecm1Q61508 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ecm1Q61508 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ecm1Q61508 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ecm1Q61508 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ecm1Q61508 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ecm1Q61508 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ecm1Q61508 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ecm1Q61508 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ecm1Q61508 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ecm1Q61508 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ecm1Q61508 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ecm1Q61508 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ecm1Q61508 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ecm1Q61508 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ecm1Q61508 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ecm1Q61508 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.88□□□□□ -0.03
Ecm1Q61508 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ecm1Q61508 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ecm1Q61508 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ecm1Q61508 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ecm1Q61508 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.88□□□□□ -0.03
Ecm1Q61508 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.88□□□□□ -0.03
Ecm1Q61508 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ecm1Q61508 Gm17376-201ENSMUST00000166016 84 ntBASIC14.88□□□□□ -0.03
Ecm1Q61508 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ecm1Q61508 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.88□□□□□ -0.03
Ecm1Q61508 Gm37042-201ENSMUST00000193816 581 ntBASIC14.88□□□□□ -0.03
Ecm1Q61508 Gm18584-201ENSMUST00000203098 964 ntBASIC14.88□□□□□ -0.03
Ecm1Q61508 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.88□□□□□ -0.03
Ecm1Q61508 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ecm1Q61508 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ecm1Q61508 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ecm1Q61508 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Ecm1Q61508 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ecm1Q61508 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ecm1Q61508 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ecm1Q61508 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.88□□□□□ -0.03
Ecm1Q61508 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ecm1Q61508 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ecm1Q61508 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ecm1Q61508 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ecm1Q61508 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ecm1Q61508 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.87□□□□□ -0.03
Ecm1Q61508 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ecm1Q61508 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.87□□□□□ -0.03
Ecm1Q61508 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Ecm1Q61508 Gm16570-201ENSMUST00000161951 436 ntBASIC14.87□□□□□ -0.03
Ecm1Q61508 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.87□□□□□ -0.03
Ecm1Q61508 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.87□□□□□ -0.03
Ecm1Q61508 Gm20482-202ENSMUST00000174729 825 ntBASIC14.87□□□□□ -0.03
Ecm1Q61508 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ecm1Q61508 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ecm1Q61508 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ecm1Q61508 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ecm1Q61508 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ecm1Q61508 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Ecm1Q61508 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ecm1Q61508 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ecm1Q61508 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ecm1Q61508 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.86□□□□□ -0.03
Ecm1Q61508 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ecm1Q61508 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ecm1Q61508 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ecm1Q61508 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ecm1Q61508 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.86□□□□□ -0.03
Ecm1Q61508 Gm11978-201ENSMUST00000122315 466 ntBASIC14.86□□□□□ -0.03
Ecm1Q61508 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ecm1Q61508 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ecm1Q61508 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ecm1Q61508 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ecm1Q61508 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.86□□□□□ -0.03
Ecm1Q61508 Morn2-202ENSMUST00000227729 656 ntBASIC14.86□□□□□ -0.03
Ecm1Q61508 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ecm1Q61508 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ecm1Q61508 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ecm1Q61508 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ecm1Q61508 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.86□□□□□ -0.03
Ecm1Q61508 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ecm1Q61508 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.86□□□□□ -0.03
Ecm1Q61508 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ecm1Q61508 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms