Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Gm8213-201ENSMUST00000118191 441 ntBASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rc3h1Q4VGL6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Gm14350-201ENSMUST00000116642 640 ntBASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Gm40466-201ENSMUST00000212174 422 ntBASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rc3h1Q4VGL6 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Gm23931-201ENSMUST00000103842 109 ntBASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Gm29705-201ENSMUST00000212598 474 ntBASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rc3h1Q4VGL6 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms