Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Gm27437-201ENSMUST00000183429 107 ntBASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.39□□□□□ -0.11
Syne3Q4FZC9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Gm8927-201ENSMUST00000181978 981 ntBASIC14.38□□□□□ -0.11
Syne3Q4FZC9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.38□□□□□ -0.11
Syne3Q4FZC9 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Gm3222-201ENSMUST00000071282 990 ntBASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Syne3Q4FZC9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Mir698-201ENSMUST00000102164 109 ntBASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Gm6912-201ENSMUST00000117218 544 ntBASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Gm13385-201ENSMUST00000121089 220 ntBASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Gm15321-201ENSMUST00000121290 288 ntBASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Gm9797-201ENSMUST00000052902 613 ntBASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms