Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Gm2231-201ENSMUST00000125661 612 ntBASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Gm44364-201ENSMUST00000198368 141 ntBASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Gm9368-201ENSMUST00000219348 831 ntBASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Cts7-204ENSMUST00000225321 1257 ntBASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Gm24526-201ENSMUST00000082921 158 ntBASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upf3aQ3ULJ3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Gm6447-201ENSMUST00000118905 835 ntBASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upf3aQ3ULJ3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3aQ3ULJ3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3aQ3ULJ3 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.17□□□□□ -0.14
Upf3aQ3ULJ3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3aQ3ULJ3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3aQ3ULJ3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3aQ3ULJ3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3aQ3ULJ3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Upf3aQ3ULJ3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms