Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC16.82■□□□□ 0.28
Col1a2Q01149 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.82■□□□□ 0.28
Col1a2Q01149 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC16.82■□□□□ 0.28
Col1a2Q01149 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.82■□□□□ 0.28
Col1a2Q01149 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC16.82■□□□□ 0.28
Col1a2Q01149 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC16.82■□□□□ 0.28
Col1a2Q01149 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.82■□□□□ 0.28
Col1a2Q01149 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC16.82■□□□□ 0.28
Col1a2Q01149 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.82■□□□□ 0.28
Col1a2Q01149 Gm45930-201ENSMUST00000221330 292 ntBASIC16.82■□□□□ 0.28
Col1a2Q01149 AC140406.1-201ENSMUST00000226481 465 ntBASIC16.82■□□□□ 0.28
Col1a2Q01149 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Col1a2Q01149 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Col1a2Q01149 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.82■□□□□ 0.28
Col1a2Q01149 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.82■□□□□ 0.28
Col1a2Q01149 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.82■□□□□ 0.28
Col1a2Q01149 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.81■□□□□ 0.28
Col1a2Q01149 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col1a2Q01149 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Col1a2Q01149 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col1a2Q01149 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.81■□□□□ 0.28
Col1a2Q01149 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col1a2Q01149 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.81■□□□□ 0.28
Col1a2Q01149 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC16.81■□□□□ 0.28
Col1a2Q01149 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col1a2Q01149 Gm8801-201ENSMUST00000173255 1064 ntBASIC16.81■□□□□ 0.28
Col1a2Q01149 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.81■□□□□ 0.28
Col1a2Q01149 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.81■□□□□ 0.28
Col1a2Q01149 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.81■□□□□ 0.28
Col1a2Q01149 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col1a2Q01149 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.81■□□□□ 0.28
Col1a2Q01149 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.81■□□□□ 0.28
Col1a2Q01149 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Col1a2Q01149 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col1a2Q01149 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col1a2Q01149 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col1a2Q01149 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.81■□□□□ 0.28
Col1a2Q01149 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col1a2Q01149 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Col1a2Q01149 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Col1a2Q01149 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Col1a2Q01149 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Gm11591-201ENSMUST00000120063 702 ntBASIC16.8■□□□□ 0.28
Col1a2Q01149 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.8■□□□□ 0.28
Col1a2Q01149 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC16.8■□□□□ 0.28
Col1a2Q01149 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC16.8■□□□□ 0.28
Col1a2Q01149 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 AC022775.2-201ENSMUST00000227885 646 ntBASIC16.8■□□□□ 0.28
Col1a2Q01149 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Col1a2Q01149 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Col1a2Q01149 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col1a2Q01149 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Col1a2Q01149 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col1a2Q01149 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col1a2Q01149 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col1a2Q01149 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col1a2Q01149 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Col1a2Q01149 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Col1a2Q01149 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC16.79■□□□□ 0.28
Col1a2Q01149 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Col1a2Q01149 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.79■□□□□ 0.28
Col1a2Q01149 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Col1a2Q01149 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col1a2Q01149 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col1a2Q01149 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col1a2Q01149 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms