Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC18.13■□□□□ 0.49
Nphp4P59240 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC18.13■□□□□ 0.49
Nphp4P59240 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC18.13■□□□□ 0.49
Nphp4P59240 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC18.13■□□□□ 0.49
Nphp4P59240 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Nphp4P59240 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC18.13■□□□□ 0.49
Nphp4P59240 Gm45865-201ENSMUST00000211815 945 ntBASIC18.13■□□□□ 0.49
Nphp4P59240 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC18.13■□□□□ 0.49
Nphp4P59240 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nphp4P59240 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Nphp4P59240 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Gm5639-201ENSMUST00000122305 2403 ntBASIC18.13■□□□□ 0.49
Nphp4P59240 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nphp4P59240 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Nphp4P59240 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
Nphp4P59240 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nphp4P59240 Gm10676-201ENSMUST00000098778 3221 ntBASIC18.12■□□□□ 0.49
Nphp4P59240 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Nphp4P59240 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC18.12■□□□□ 0.49
Nphp4P59240 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC18.12■□□□□ 0.49
Nphp4P59240 Gm22323-201ENSMUST00000103832 109 ntBASIC18.12■□□□□ 0.49
Nphp4P59240 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nphp4P59240 Gm17208-201ENSMUST00000168388 535 ntBASIC18.12■□□□□ 0.49
Nphp4P59240 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nphp4P59240 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nphp4P59240 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nphp4P59240 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nphp4P59240 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 CT009713.10-201ENSMUST00000225013 1986 ntBASIC18.11■□□□□ 0.49
Nphp4P59240 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC18.11■□□□□ 0.49
Nphp4P59240 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC18.11■□□□□ 0.49
Nphp4P59240 Gm12241-201ENSMUST00000118330 726 ntBASIC18.11■□□□□ 0.49
Nphp4P59240 Gm13297-201ENSMUST00000120205 934 ntBASIC18.11■□□□□ 0.49
Nphp4P59240 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 Gm6621-201ENSMUST00000193251 772 ntBASIC18.11■□□□□ 0.49
Nphp4P59240 Gm9368-201ENSMUST00000219348 831 ntBASIC18.11■□□□□ 0.49
Nphp4P59240 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 Gm28386-201ENSMUST00000189147 1849 ntBASIC18.11■□□□□ 0.49
Nphp4P59240 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Nphp4P59240 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Nphp4P59240 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nphp4P59240 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nphp4P59240 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nphp4P59240 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nphp4P59240 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nphp4P59240 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nphp4P59240 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Nphp4P59240 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Nphp4P59240 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nphp4P59240 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC18.1■□□□□ 0.49
Nphp4P59240 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nphp4P59240 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC18.1■□□□□ 0.49
Nphp4P59240 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nphp4P59240 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
Nphp4P59240 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nphp4P59240 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nphp4P59240 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC18.1■□□□□ 0.49
Nphp4P59240 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nphp4P59240 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nphp4P59240 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nphp4P59240 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nphp4P59240 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nphp4P59240 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nphp4P59240 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nphp4P59240 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Nphp4P59240 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nphp4P59240 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nphp4P59240 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nphp4P59240 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nphp4P59240 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nphp4P59240 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC18.09■□□□□ 0.49
Nphp4P59240 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC18.09■□□□□ 0.49
Nphp4P59240 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC18.09■□□□□ 0.49
Nphp4P59240 Gm13316-201ENSMUST00000140537 691 ntBASIC18.09■□□□□ 0.49
Nphp4P59240 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nphp4P59240 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nphp4P59240 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC18.09■□□□□ 0.49
Nphp4P59240 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC18.09■□□□□ 0.49
Nphp4P59240 Ighv8-10-201ENSMUST00000199579 358 ntBASIC18.09■□□□□ 0.49
Nphp4P59240 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms