Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fdft1P53798 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fdft1P53798 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Fdft1P53798 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.55□□□□□ -0.24
Fdft1P53798 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fdft1P53798 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fdft1P53798 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fdft1P53798 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Fdft1P53798 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.55□□□□□ -0.24
Fdft1P53798 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fdft1P53798 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Fdft1P53798 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fdft1P53798 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.55□□□□□ -0.24
Fdft1P53798 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Fdft1P53798 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Fdft1P53798 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Fdft1P53798 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.54□□□□□ -0.24
Fdft1P53798 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.54□□□□□ -0.24
Fdft1P53798 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.54□□□□□ -0.24
Fdft1P53798 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.54□□□□□ -0.24
Fdft1P53798 Gm4804-201ENSMUST00000182234 999 ntBASIC13.54□□□□□ -0.24
Fdft1P53798 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.54□□□□□ -0.24
Fdft1P53798 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.54□□□□□ -0.24
Fdft1P53798 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.54□□□□□ -0.24
Fdft1P53798 Gm7775-201ENSMUST00000218871 853 ntBASIC13.54□□□□□ -0.24
Fdft1P53798 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.54□□□□□ -0.24
Fdft1P53798 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.54□□□□□ -0.24
Fdft1P53798 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Fdft1P53798 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Fdft1P53798 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Fdft1P53798 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Fdft1P53798 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Fdft1P53798 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.54□□□□□ -0.24
Fdft1P53798 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Fdft1P53798 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.54□□□□□ -0.24
Fdft1P53798 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fdft1P53798 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Fdft1P53798 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.53□□□□□ -0.24
Fdft1P53798 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Fdft1P53798 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.53□□□□□ -0.24
Fdft1P53798 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Fdft1P53798 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Fdft1P53798 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Fdft1P53798 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.53□□□□□ -0.24
Fdft1P53798 Gm13385-201ENSMUST00000121089 220 ntBASIC13.53□□□□□ -0.24
Fdft1P53798 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Fdft1P53798 Gm10766-202ENSMUST00000194123 606 ntBASIC13.53□□□□□ -0.24
Fdft1P53798 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Fdft1P53798 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Fdft1P53798 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.53□□□□□ -0.24
Fdft1P53798 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.53□□□□□ -0.24
Fdft1P53798 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms