Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox6P40645 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.73□□□□□ -0.37
Sox6P40645 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox6P40645 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sox6P40645 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Sox6P40645 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox6P40645 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Mir125a-201ENSMUST00000083545 68 ntBASIC12.73□□□□□ -0.37
Sox6P40645 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sox6P40645 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.73□□□□□ -0.37
Sox6P40645 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox6P40645 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.72□□□□□ -0.37
Sox6P40645 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 AA543401-201ENSMUST00000164248 1269 ntBASIC12.72□□□□□ -0.37
Sox6P40645 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Sox6P40645 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.72□□□□□ -0.37
Sox6P40645 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox6P40645 Dupd1-202ENSMUST00000224735 548 ntBASIC12.72□□□□□ -0.37
Sox6P40645 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sox6P40645 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.72□□□□□ -0.37
Sox6P40645 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Sox6P40645 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sox6P40645 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sox6P40645 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.72□□□□□ -0.37
Sox6P40645 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Sox6P40645 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox6P40645 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.71□□□□□ -0.37
Sox6P40645 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sox6P40645 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Sox6P40645 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Sox6P40645 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 Gm15957-201ENSMUST00000118893 974 ntBASIC12.71□□□□□ -0.37
Sox6P40645 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.71□□□□□ -0.37
Sox6P40645 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.71□□□□□ -0.37
Sox6P40645 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sox6P40645 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sox6P40645 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Sox6P40645 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox6P40645 BC001981-202ENSMUST00000191393 1545 ntBASIC12.71□□□□□ -0.38
Sox6P40645 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms