Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc8P09025 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Hoxc8P09025 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.28□□□□□ -0.12
Hoxc8P09025 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.28□□□□□ -0.12
Hoxc8P09025 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc8P09025 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hoxc8P09025 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.28□□□□□ -0.12
Hoxc8P09025 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc8P09025 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.28□□□□□ -0.12
Hoxc8P09025 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.28□□□□□ -0.12
Hoxc8P09025 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.28□□□□□ -0.12
Hoxc8P09025 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc8P09025 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc8P09025 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc8P09025 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc8P09025 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Hoxc8P09025 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc8P09025 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc8P09025 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc8P09025 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc8P09025 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc8P09025 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc8P09025 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc8P09025 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc8P09025 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc8P09025 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.27□□□□□ -0.12
Hoxc8P09025 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc8P09025 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc8P09025 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Hoxc8P09025 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.27□□□□□ -0.12
Hoxc8P09025 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc8P09025 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc8P09025 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc8P09025 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.27□□□□□ -0.13
Hoxc8P09025 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.27□□□□□ -0.13
Hoxc8P09025 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.27□□□□□ -0.13
Hoxc8P09025 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc8P09025 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc8P09025 Gm8738-201ENSMUST00000172606 329 ntBASIC14.27□□□□□ -0.13
Hoxc8P09025 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Hoxc8P09025 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Hoxc8P09025 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.27□□□□□ -0.13
Hoxc8P09025 Gm6458-201ENSMUST00000211573 635 ntBASIC14.27□□□□□ -0.13
Hoxc8P09025 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.27□□□□□ -0.13
Hoxc8P09025 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc8P09025 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc8P09025 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc8P09025 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc8P09025 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc8P09025 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc8P09025 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Hoxc8P09025 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc8P09025 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc8P09025 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc8P09025 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc8P09025 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc8P09025 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc8P09025 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc8P09025 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Hoxc8P09025 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc8P09025 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc8P09025 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.26□□□□□ -0.13
Hoxc8P09025 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.26□□□□□ -0.13
Hoxc8P09025 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.26□□□□□ -0.13
Hoxc8P09025 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc8P09025 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc8P09025 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.26□□□□□ -0.13
Hoxc8P09025 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.26□□□□□ -0.13
Hoxc8P09025 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hoxc8P09025 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hoxc8P09025 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc8P09025 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc8P09025 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc8P09025 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc8P09025 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxc8P09025 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc8P09025 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc8P09025 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc8P09025 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc8P09025 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms