Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.35□□□□□ -0.43
Col4a2P08122 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a2P08122 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Col4a2P08122 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col4a2P08122 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.34□□□□□ -0.43
Col4a2P08122 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.34□□□□□ -0.43
Col4a2P08122 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.34□□□□□ -0.43
Col4a2P08122 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.34□□□□□ -0.43
Col4a2P08122 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.34□□□□□ -0.43
Col4a2P08122 Gm13316-201ENSMUST00000140537 691 ntBASIC12.34□□□□□ -0.43
Col4a2P08122 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.34□□□□□ -0.43
Col4a2P08122 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Col4a2P08122 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col4a2P08122 Mir7221-201ENSMUST00000184009 72 ntBASIC12.34□□□□□ -0.43
Col4a2P08122 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Col4a2P08122 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.34□□□□□ -0.43
Col4a2P08122 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.34□□□□□ -0.43
Col4a2P08122 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.34□□□□□ -0.43
Col4a2P08122 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.34□□□□□ -0.43
Col4a2P08122 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.34□□□□□ -0.43
Col4a2P08122 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.34□□□□□ -0.43
Col4a2P08122 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.34□□□□□ -0.43
Col4a2P08122 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col4a2P08122 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.34□□□□□ -0.43
Col4a2P08122 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.34□□□□□ -0.43
Col4a2P08122 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.34□□□□□ -0.43
Col4a2P08122 Gm25732-201ENSMUST00000175168 60 ntBASIC12.34□□□□□ -0.43
Col4a2P08122 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.34□□□□□ -0.43
Col4a2P08122 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Col4a2P08122 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a2P08122 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.34□□□□□ -0.43
Col4a2P08122 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.34□□□□□ -0.43
Col4a2P08122 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col4a2P08122 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.33□□□□□ -0.43
Col4a2P08122 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.33□□□□□ -0.44
Col4a2P08122 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.33□□□□□ -0.44
Col4a2P08122 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.33□□□□□ -0.44
Col4a2P08122 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.33□□□□□ -0.44
Col4a2P08122 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms