Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.31□□□□□ -0.28
Hoxa4P06798 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa4P06798 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Hoxa4P06798 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.3□□□□□ -0.28
Hoxa4P06798 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.3□□□□□ -0.28
Hoxa4P06798 Gm11814-201ENSMUST00000119515 929 ntBASIC13.3□□□□□ -0.28
Hoxa4P06798 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Gm5745-201ENSMUST00000183748 313 ntBASIC13.3□□□□□ -0.28
Hoxa4P06798 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.3□□□□□ -0.28
Hoxa4P06798 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.3□□□□□ -0.28
Hoxa4P06798 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hoxa4P06798 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Hoxa4P06798 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Hoxa4P06798 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa4P06798 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.3□□□□□ -0.28
Hoxa4P06798 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.3□□□□□ -0.28
Hoxa4P06798 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.29□□□□□ -0.28
Hoxa4P06798 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hoxa4P06798 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.29□□□□□ -0.28
Hoxa4P06798 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.29□□□□□ -0.28
Hoxa4P06798 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Hoxa4P06798 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.29□□□□□ -0.28
Hoxa4P06798 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.29□□□□□ -0.28
Hoxa4P06798 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Hoxa4P06798 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Gm5035-201ENSMUST00000215581 927 ntBASIC13.29□□□□□ -0.28
Hoxa4P06798 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.29□□□□□ -0.28
Hoxa4P06798 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.29□□□□□ -0.28
Hoxa4P06798 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hoxa4P06798 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hoxa4P06798 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hoxa4P06798 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.29□□□□□ -0.28
Hoxa4P06798 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.29□□□□□ -0.28
Hoxa4P06798 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa4P06798 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.29□□□□□ -0.28
Hoxa4P06798 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.29□□□□□ -0.28
Hoxa4P06798 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.29□□□□□ -0.28
Hoxa4P06798 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.28□□□□□ -0.28
Hoxa4P06798 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa4P06798 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Hoxa4P06798 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms