Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Gm18041-201ENSMUST00000218210 618 ntBASIC12.4□□□□□ -0.42
P01852 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.4□□□□□ -0.42
P01852 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.4□□□□□ -0.42
P01852 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.4□□□□□ -0.42
P01852 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
P01852 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
P01852 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
P01852 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
P01852 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
P01852 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P01852 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
P01852 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
P01852 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.4□□□□□ -0.43
P01852 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
P01852 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.39□□□□□ -0.43
P01852 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.39□□□□□ -0.43
P01852 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.39□□□□□ -0.43
P01852 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 Mir6392-201ENSMUST00000184924 108 ntBASIC12.39□□□□□ -0.43
P01852 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.39□□□□□ -0.43
P01852 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.39□□□□□ -0.43
P01852 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
P01852 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
P01852 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
P01852 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
P01852 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.39□□□□□ -0.43
P01852 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P01852 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
P01852 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
P01852 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.38□□□□□ -0.43
P01852 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
P01852 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 Gm11524-201ENSMUST00000119349 807 ntBASIC12.38□□□□□ -0.43
P01852 Gm12341-201ENSMUST00000119724 503 ntBASIC12.38□□□□□ -0.43
P01852 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.38□□□□□ -0.43
P01852 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.38□□□□□ -0.43
P01852 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.38□□□□□ -0.43
P01852 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.38□□□□□ -0.43
P01852 Gm19078-201ENSMUST00000206311 727 ntBASIC12.38□□□□□ -0.43
P01852 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.38□□□□□ -0.43
P01852 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.38□□□□□ -0.43
P01852 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.38□□□□□ -0.43
P01852 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.38□□□□□ -0.43
P01852 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
P01852 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P01852 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
P01852 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms