Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cl1O35188 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Cx3cl1O35188 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.74□□□□□ -0.37
Cx3cl1O35188 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cx3cl1O35188 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Mir6392-201ENSMUST00000184924 108 ntBASIC12.74□□□□□ -0.37
Cx3cl1O35188 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.74□□□□□ -0.37
Cx3cl1O35188 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.74□□□□□ -0.37
Cx3cl1O35188 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cl1O35188 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.73□□□□□ -0.37
Cx3cl1O35188 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.73□□□□□ -0.37
Cx3cl1O35188 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Gm19078-201ENSMUST00000206311 727 ntBASIC12.73□□□□□ -0.37
Cx3cl1O35188 Gm45668-201ENSMUST00000211271 493 ntBASIC12.73□□□□□ -0.37
Cx3cl1O35188 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.73□□□□□ -0.37
Cx3cl1O35188 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cl1O35188 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Gm11524-201ENSMUST00000119349 807 ntBASIC12.72□□□□□ -0.37
Cx3cl1O35188 Gm12341-201ENSMUST00000119724 503 ntBASIC12.72□□□□□ -0.37
Cx3cl1O35188 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.72□□□□□ -0.37
Cx3cl1O35188 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.72□□□□□ -0.37
Cx3cl1O35188 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms