Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm5364-201ENSMUST00000216789 889 ntBASIC12.34□□□□□ -0.43
Shisa8J3QNX5 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Syt7-205ENSMUST00000224135 1557 ntBASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Shisa8J3QNX5 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Shisa8J3QNX5 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Gm11745-201ENSMUST00000121669 448 ntBASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Gm12260-201ENSMUST00000122447 411 ntBASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Gm6443-201ENSMUST00000203599 874 ntBASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shisa8J3QNX5 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Gm17271-201ENSMUST00000165535 355 ntBASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Mir3113-201ENSMUST00000175478 76 ntBASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.32□□□□□ -0.44
Shisa8J3QNX5 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Shisa8J3QNX5 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shisa8J3QNX5 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms