Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm14140-201ENSMUST00000119999 995 ntBASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Gm6222-201ENSMUST00000120787 396 ntBASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Krt88Q9CPR6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Gm37714-201ENSMUST00000194742 342 ntBASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Gm44492-201ENSMUST00000197012 141 ntBASIC12.22□□□□□ -0.45
Krt88Q9CPR6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Krt88Q9CPR6 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Mir698-201ENSMUST00000102164 109 ntBASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Gm38225-201ENSMUST00000194001 393 ntBASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Krt88Q9CPR6 Syt7-205ENSMUST00000224135 1557 ntBASIC12.21□□□□□ -0.46
Krt88Q9CPR6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Krt88Q9CPR6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Krt88Q9CPR6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
Krt88Q9CPR6 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Krt88Q9CPR6 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms