Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Gm18889-201ENSMUST00000174284 929 ntBASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Auts2-212ENSMUST00000178555 309 ntBASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Mir6990-201ENSMUST00000183724 91 ntBASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 AC154757.2-201ENSMUST00000228885 743 ntBASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb3Q91XZ7 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Gm11543-201ENSMUST00000120758 370 ntBASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Gm29013-201ENSMUST00000187431 237 ntBASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Gm10576-201ENSMUST00000191927 825 ntBASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Gm45657-201ENSMUST00000211318 1349 ntBASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb3Q91XZ7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Gm15626-201ENSMUST00000117478 868 ntBASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Gm14042-201ENSMUST00000120139 833 ntBASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Gm18595-201ENSMUST00000175736 1068 ntBASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms