Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Gm4760-201ENSMUST00000119663 1030 ntBASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 D9Wsu149-201ENSMUST00000214169 594 ntBASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx54Q8K4L0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Gm11930-201ENSMUST00000117788 190 ntBASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Gm13611-201ENSMUST00000118269 318 ntBASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Gm4993-201ENSMUST00000118719 1174 ntBASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Gm9550-201ENSMUST00000161130 862 ntBASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Ddx54Q8K4L0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Gm25214-201ENSMUST00000104573 129 ntBASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Gm27046-201ENSMUST00000182160 463 ntBASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Gm5950-201ENSMUST00000213337 772 ntBASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.59■□□□□ 0.41
Ddx54Q8K4L0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx54Q8K4L0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx54Q8K4L0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC17.58■□□□□ 0.41
Ddx54Q8K4L0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx54Q8K4L0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx54Q8K4L0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx54Q8K4L0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx54Q8K4L0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ddx54Q8K4L0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx54Q8K4L0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx54Q8K4L0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx54Q8K4L0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.58■□□□□ 0.4
Ddx54Q8K4L0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx54Q8K4L0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx54Q8K4L0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms