Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Trim47Q8C0E3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim47Q8C0E3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.03■□□□□ -0
Trim47Q8C0E3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Trim47Q8C0E3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.03■□□□□ -0
Trim47Q8C0E3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.03■□□□□ -0
Trim47Q8C0E3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim47Q8C0E3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.02■□□□□ -0
Trim47Q8C0E3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.02■□□□□ -0
Trim47Q8C0E3 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.02■□□□□ -0
Trim47Q8C0E3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Trim47Q8C0E3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim47Q8C0E3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim47Q8C0E3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.02■□□□□ -0
Trim47Q8C0E3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim47Q8C0E3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim47Q8C0E3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim47Q8C0E3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim47Q8C0E3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim47Q8C0E3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trim47Q8C0E3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trim47Q8C0E3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trim47Q8C0E3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim47Q8C0E3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim47Q8C0E3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim47Q8C0E3 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.02■□□□□ -0
Trim47Q8C0E3 Mir1894-201ENSMUST00000122802 81 ntBASIC15.02■□□□□ -0
Trim47Q8C0E3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim47Q8C0E3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim47Q8C0E3 Gm38144-201ENSMUST00000192790 465 ntBASIC15.02■□□□□ -0
Trim47Q8C0E3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim47Q8C0E3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trim47Q8C0E3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim47Q8C0E3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim47Q8C0E3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim47Q8C0E3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Trim47Q8C0E3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim47Q8C0E3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim47Q8C0E3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trim47Q8C0E3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim47Q8C0E3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim47Q8C0E3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Trim47Q8C0E3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim47Q8C0E3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.02□□□□□ -0.01
Trim47Q8C0E3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim47Q8C0E3 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Gm8652-201ENSMUST00000181363 964 ntBASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim47Q8C0E3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Trim47Q8C0E3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
Trim47Q8C0E3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim47Q8C0E3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim47Q8C0E3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms