Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trerf1Q8BXJ2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Mir6977-201ENSMUST00000184960 64 ntBASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Gm44608-201ENSMUST00000206827 855 ntBASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Gm9229-201ENSMUST00000222777 126 ntBASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trerf1Q8BXJ2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Gm15487-201ENSMUST00000122373 465 ntBASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Gm7063-201ENSMUST00000186840 981 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms