Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Mir698-201ENSMUST00000102164 109 ntBASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Gm28630-201ENSMUST00000187806 498 ntBASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Gm24543-201ENSMUST00000103867 82 ntBASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf38Q8BI21 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Gm15460-201ENSMUST00000118147 391 ntBASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Gm33320-201ENSMUST00000192232 530 ntBASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms