Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Samm50Q8BGH2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Samm50Q8BGH2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Samm50Q8BGH2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.92■□□□□ 0.14
Samm50Q8BGH2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Samm50Q8BGH2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Samm50Q8BGH2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Samm50Q8BGH2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Samm50Q8BGH2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Samm50Q8BGH2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Samm50Q8BGH2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Samm50Q8BGH2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Samm50Q8BGH2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Gm16215-201ENSMUST00000161990 637 ntBASIC15.91■□□□□ 0.14
Samm50Q8BGH2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Syt7-204ENSMUST00000223586 1344 ntBASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Samm50Q8BGH2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Gm15460-201ENSMUST00000118147 391 ntBASIC15.9■□□□□ 0.14
Samm50Q8BGH2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Samm50Q8BGH2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Samm50Q8BGH2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Samm50Q8BGH2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Samm50Q8BGH2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Samm50Q8BGH2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Samm50Q8BGH2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Samm50Q8BGH2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Samm50Q8BGH2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Samm50Q8BGH2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Samm50Q8BGH2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Samm50Q8BGH2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Samm50Q8BGH2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Samm50Q8BGH2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Samm50Q8BGH2 Gm15393-201ENSMUST00000120499 219 ntBASIC15.89■□□□□ 0.13
Samm50Q8BGH2 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.89■□□□□ 0.13
Samm50Q8BGH2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Samm50Q8BGH2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.89■□□□□ 0.13
Samm50Q8BGH2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 131.3 ms