Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh19Q80TF3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh19Q80TF3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh19Q80TF3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms