Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Gm24694-201ENSMUST00000180054 110 ntBASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Gm27663-201ENSMUST00000184839 110 ntBASIC14.42□□□□□ -0.1
Syne3Q4FZC9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Gm29667-201ENSMUST00000190817 490 ntBASIC14.41□□□□□ -0.1
Syne3Q4FZC9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Syne3Q4FZC9 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Gm16215-201ENSMUST00000161990 637 ntBASIC14.4□□□□□ -0.1
Syne3Q4FZC9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Gm7730-201ENSMUST00000212486 454 ntBASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Syne3Q4FZC9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Syne3Q4FZC9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms