Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.98■□□□□ 0.15
Limch1Q3UH68 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.98■□□□□ 0.15
Limch1Q3UH68 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.97■□□□□ 0.15
Limch1Q3UH68 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.97■□□□□ 0.15
Limch1Q3UH68 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.97■□□□□ 0.15
Limch1Q3UH68 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.97■□□□□ 0.15
Limch1Q3UH68 Gm19220-201ENSMUST00000222682 803 ntBASIC15.97■□□□□ 0.15
Limch1Q3UH68 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.97■□□□□ 0.15
Limch1Q3UH68 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Limch1Q3UH68 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.96■□□□□ 0.15
Limch1Q3UH68 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.96■□□□□ 0.15
Limch1Q3UH68 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.96■□□□□ 0.15
Limch1Q3UH68 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.96■□□□□ 0.15
Limch1Q3UH68 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Limch1Q3UH68 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Limch1Q3UH68 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Limch1Q3UH68 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Limch1Q3UH68 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.96■□□□□ 0.14
Limch1Q3UH68 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Limch1Q3UH68 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.95■□□□□ 0.14
Limch1Q3UH68 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Limch1Q3UH68 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.95■□□□□ 0.14
Limch1Q3UH68 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Limch1Q3UH68 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Limch1Q3UH68 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Limch1Q3UH68 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Limch1Q3UH68 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.95■□□□□ 0.14
Limch1Q3UH68 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Limch1Q3UH68 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Limch1Q3UH68 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Limch1Q3UH68 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Limch1Q3UH68 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.95■□□□□ 0.14
Limch1Q3UH68 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Limch1Q3UH68 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Limch1Q3UH68 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.95■□□□□ 0.14
Limch1Q3UH68 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms