Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Gm8810-201ENSMUST00000172895 754 ntBASIC16.09■□□□□ 0.17
Lins1Q3U1D0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Proscos-202ENSMUST00000178990 666 ntBASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.09■□□□□ 0.17
Lins1Q3U1D0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lins1Q3U1D0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lins1Q3U1D0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lins1Q3U1D0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Gm10156-201ENSMUST00000122364 462 ntBASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Gm17330-201ENSMUST00000221047 165 ntBASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lins1Q3U1D0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Gm5187-201ENSMUST00000117317 991 ntBASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Dctn4-202ENSMUST00000223590 1530 ntBASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Lins1Q3U1D0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Gm8213-201ENSMUST00000118191 441 ntBASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Lins1Q3U1D0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms