Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim63Q38HM4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim63Q38HM4 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trim63Q38HM4 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.13□□□□□ -0.63
Trim63Q38HM4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim63Q38HM4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim63Q38HM4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim63Q38HM4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim63Q38HM4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim63Q38HM4 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.12□□□□□ -0.63
Trim63Q38HM4 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.12□□□□□ -0.63
Trim63Q38HM4 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Gm8344-201ENSMUST00000119813 856 ntBASIC11.12□□□□□ -0.63
Trim63Q38HM4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trim63Q38HM4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.12□□□□□ -0.63
Trim63Q38HM4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.12□□□□□ -0.63
Trim63Q38HM4 Gm18101-201ENSMUST00000215769 548 ntBASIC11.12□□□□□ -0.63
Trim63Q38HM4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.12□□□□□ -0.63
Trim63Q38HM4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.12□□□□□ -0.63
Trim63Q38HM4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.12□□□□□ -0.63
Trim63Q38HM4 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim63Q38HM4 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trim63Q38HM4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.11□□□□□ -0.63
Trim63Q38HM4 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.11□□□□□ -0.63
Trim63Q38HM4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Gm13474-201ENSMUST00000122466 815 ntBASIC11.11□□□□□ -0.63
Trim63Q38HM4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Gm37856-201ENSMUST00000191634 999 ntBASIC11.11□□□□□ -0.63
Trim63Q38HM4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Odf3b-204ENSMUST00000227834 930 ntBASIC11.11□□□□□ -0.63
Trim63Q38HM4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms