Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.38□□□□□ -0.43
Scn1bP97952 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn1bP97952 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.38□□□□□ -0.43
Scn1bP97952 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Scn1bP97952 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Scn1bP97952 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.38□□□□□ -0.43
Scn1bP97952 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Scn1bP97952 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Scn1bP97952 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Scn1bP97952 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Scn1bP97952 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn1bP97952 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.37□□□□□ -0.43
Scn1bP97952 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.37□□□□□ -0.43
Scn1bP97952 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.37□□□□□ -0.43
Scn1bP97952 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.37□□□□□ -0.43
Scn1bP97952 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Gm45098-201ENSMUST00000207179 657 ntBASIC12.37□□□□□ -0.43
Scn1bP97952 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.37□□□□□ -0.43
Scn1bP97952 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.37□□□□□ -0.43
Scn1bP97952 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.37□□□□□ -0.43
Scn1bP97952 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.37□□□□□ -0.43
Scn1bP97952 Gm10154-201ENSMUST00000084445 354 ntBASIC12.37□□□□□ -0.43
Scn1bP97952 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Scn1bP97952 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Scn1bP97952 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Scn1bP97952 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Scn1bP97952 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn1bP97952 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Scn1bP97952 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Scn1bP97952 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Scn1bP97952 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Scn1bP97952 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.37□□□□□ -0.43
Scn1bP97952 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1bP97952 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1bP97952 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1bP97952 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn1bP97952 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1bP97952 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1bP97952 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn1bP97952 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1bP97952 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn1bP97952 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.36□□□□□ -0.43
Scn1bP97952 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1bP97952 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.36□□□□□ -0.43
Scn1bP97952 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Scn1bP97952 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.36□□□□□ -0.43
Scn1bP97952 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1bP97952 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.36□□□□□ -0.43
Scn1bP97952 Gm44719-201ENSMUST00000206404 149 ntBASIC12.36□□□□□ -0.43
Scn1bP97952 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn1bP97952 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn1bP97952 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.36□□□□□ -0.43
Scn1bP97952 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.36□□□□□ -0.43
Scn1bP97952 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms