Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.82□□□□□ -0.36
Nup43P59235 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Nup43P59235 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nup43P59235 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nup43P59235 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Nup43P59235 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.81□□□□□ -0.36
Nup43P59235 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.81□□□□□ -0.36
Nup43P59235 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nup43P59235 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nup43P59235 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.81□□□□□ -0.36
Nup43P59235 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.81□□□□□ -0.36
Nup43P59235 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.81□□□□□ -0.36
Nup43P59235 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.81□□□□□ -0.36
Nup43P59235 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.81□□□□□ -0.36
Nup43P59235 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Gm18307-201ENSMUST00000206864 949 ntBASIC12.81□□□□□ -0.36
Nup43P59235 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Gm17330-201ENSMUST00000221047 165 ntBASIC12.81□□□□□ -0.36
Nup43P59235 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.81□□□□□ -0.36
Nup43P59235 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.81□□□□□ -0.36
Nup43P59235 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Gm24447-201ENSMUST00000083977 338 ntBASIC12.81□□□□□ -0.36
Nup43P59235 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.81□□□□□ -0.36
Nup43P59235 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.81□□□□□ -0.36
Nup43P59235 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Nup43P59235 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nup43P59235 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.81□□□□□ -0.36
Nup43P59235 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup43P59235 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.81□□□□□ -0.36
Nup43P59235 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.8□□□□□ -0.36
Nup43P59235 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.8□□□□□ -0.36
Nup43P59235 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.8□□□□□ -0.36
Nup43P59235 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nup43P59235 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.8□□□□□ -0.36
Nup43P59235 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.8□□□□□ -0.36
Nup43P59235 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.8□□□□□ -0.36
Nup43P59235 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.8□□□□□ -0.36
Nup43P59235 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.8□□□□□ -0.36
Nup43P59235 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nup43P59235 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.8□□□□□ -0.36
Nup43P59235 Gm45668-201ENSMUST00000211271 493 ntBASIC12.8□□□□□ -0.36
Nup43P59235 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.8□□□□□ -0.36
Nup43P59235 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.8□□□□□ -0.36
Nup43P59235 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Nup43P59235 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.8□□□□□ -0.36
Nup43P59235 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nup43P59235 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Nup43P59235 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nup43P59235 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms