Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Upk2P38575 Syt7-204ENSMUST00000223586 1344 ntBASIC11.9□□□□□ -0.5
Upk2P38575 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Upk2P38575 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.9□□□□□ -0.5
Upk2P38575 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.9□□□□□ -0.5
Upk2P38575 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.9□□□□□ -0.5
Upk2P38575 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.9□□□□□ -0.5
Upk2P38575 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk2P38575 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.9□□□□□ -0.51
Upk2P38575 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Upk2P38575 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Upk2P38575 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk2P38575 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk2P38575 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Upk2P38575 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk2P38575 Gm43094-201ENSMUST00000196549 921 ntBASIC11.89□□□□□ -0.51
Upk2P38575 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Upk2P38575 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Upk2P38575 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk2P38575 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.89□□□□□ -0.51
Upk2P38575 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Gm5161-201ENSMUST00000075243 853 ntBASIC11.89□□□□□ -0.51
Upk2P38575 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk2P38575 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Upk2P38575 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk2P38575 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Upk2P38575 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Upk2P38575 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.89□□□□□ -0.51
Upk2P38575 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Upk2P38575 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk2P38575 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Upk2P38575 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Upk2P38575 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.88□□□□□ -0.51
Upk2P38575 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.88□□□□□ -0.51
Upk2P38575 Gm28760-201ENSMUST00000185995 736 ntBASIC11.88□□□□□ -0.51
Upk2P38575 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.88□□□□□ -0.51
Upk2P38575 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.88□□□□□ -0.51
Upk2P38575 Gm20949-201ENSMUST00000206478 952 ntBASIC11.88□□□□□ -0.51
Upk2P38575 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.88□□□□□ -0.51
Upk2P38575 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.88□□□□□ -0.51
Upk2P38575 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.88□□□□□ -0.51
Upk2P38575 Grk6-205ENSMUST00000224653 2976 ntBASIC11.88□□□□□ -0.51
Upk2P38575 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk2P38575 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms