Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cdx1P18111 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx1P18111 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cdx1P18111 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx1P18111 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx1P18111 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx1P18111 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Cdx1P18111 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx1P18111 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx1P18111 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx1P18111 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cdx1P18111 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.97□□□□□ -0.65
Cdx1P18111 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Cdx1P18111 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cdx1P18111 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC10.97□□□□□ -0.65
Cdx1P18111 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.97□□□□□ -0.65
Cdx1P18111 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC10.97□□□□□ -0.65
Cdx1P18111 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cdx1P18111 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC10.97□□□□□ -0.65
Cdx1P18111 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Cdx1P18111 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.97□□□□□ -0.65
Cdx1P18111 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cdx1P18111 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cdx1P18111 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cdx1P18111 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Cdx1P18111 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx1P18111 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.97□□□□□ -0.65
Cdx1P18111 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Cdx1P18111 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.96□□□□□ -0.65
Cdx1P18111 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.96□□□□□ -0.65
Cdx1P18111 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cdx1P18111 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Cdx1P18111 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdx1P18111 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.96□□□□□ -0.65
Cdx1P18111 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.96□□□□□ -0.65
Cdx1P18111 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdx1P18111 Rpph1-201ENSMUST00000175096 319 ntBASIC10.96□□□□□ -0.65
Cdx1P18111 Gm8318-201ENSMUST00000182954 872 ntBASIC10.96□□□□□ -0.65
Cdx1P18111 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdx1P18111 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdx1P18111 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdx1P18111 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdx1P18111 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cdx1P18111 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdx1P18111 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cdx1P18111 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdx1P18111 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdx1P18111 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdx1P18111 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms