Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.01□□□□□ -0.33
Cntn1P12960 Gm38223-201ENSMUST00000194484 695 ntBASIC13.01□□□□□ -0.33
Cntn1P12960 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.01□□□□□ -0.33
Cntn1P12960 Gm8463-201ENSMUST00000208573 613 ntBASIC13.01□□□□□ -0.33
Cntn1P12960 Gm6983-201ENSMUST00000214912 628 ntBASIC13.01□□□□□ -0.33
Cntn1P12960 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.01□□□□□ -0.33
Cntn1P12960 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cntn1P12960 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cntn1P12960 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.01□□□□□ -0.33
Cntn1P12960 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cntn1P12960 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.01□□□□□ -0.33
Cntn1P12960 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cntn1P12960 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cntn1P12960 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Cntn1P12960 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cntn1P12960 Gm5639-201ENSMUST00000122305 2403 ntBASIC13□□□□□ -0.33
Cntn1P12960 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Gm38577-201ENSMUST00000221531 4545 ntBASIC13□□□□□ -0.33
Cntn1P12960 Gm9816-201ENSMUST00000122292 1414 ntBASIC13□□□□□ -0.33
Cntn1P12960 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13□□□□□ -0.33
Cntn1P12960 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Gm15371-201ENSMUST00000117057 784 ntBASIC13□□□□□ -0.33
Cntn1P12960 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13□□□□□ -0.33
Cntn1P12960 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13□□□□□ -0.33
Cntn1P12960 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13□□□□□ -0.33
Cntn1P12960 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cntn1P12960 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Gm24447-201ENSMUST00000083977 338 ntBASIC13□□□□□ -0.33
Cntn1P12960 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cntn1P12960 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.99□□□□□ -0.33
Cntn1P12960 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Cntn1P12960 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cntn1P12960 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cntn1P12960 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Gm42550-201ENSMUST00000201553 960 ntBASIC12.99□□□□□ -0.33
Cntn1P12960 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.99□□□□□ -0.33
Cntn1P12960 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cntn1P12960 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cntn1P12960 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.99□□□□□ -0.33
Cntn1P12960 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cntn1P12960 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms