Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc9P09633 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc9P09633 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc9P09633 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.45■□□□□ 0.38
Hoxc9P09633 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc9P09633 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hoxc9P09633 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc9P09633 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc9P09633 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Hoxc9P09633 Gm18827-201ENSMUST00000188341 790 ntBASIC17.45■□□□□ 0.38
Hoxc9P09633 Gm44985-201ENSMUST00000206202 1016 ntBASIC17.45■□□□□ 0.38
Hoxc9P09633 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc9P09633 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC17.45■□□□□ 0.38
Hoxc9P09633 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc9P09633 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc9P09633 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Hoxc9P09633 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc9P09633 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc9P09633 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc9P09633 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc9P09633 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc9P09633 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc9P09633 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc9P09633 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc9P09633 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Hoxc9P09633 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Hoxc9P09633 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hoxc9P09633 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc9P09633 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hoxc9P09633 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc9P09633 Gm4986-201ENSMUST00000119731 549 ntBASIC17.44■□□□□ 0.38
Hoxc9P09633 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc9P09633 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc9P09633 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC17.44■□□□□ 0.38
Hoxc9P09633 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC17.44■□□□□ 0.38
Hoxc9P09633 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc9P09633 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC17.44■□□□□ 0.38
Hoxc9P09633 Mospd4-201ENSMUST00000180618 576 ntBASIC17.44■□□□□ 0.38
Hoxc9P09633 Ighv1-62-201ENSMUST00000193406 350 ntBASIC17.44■□□□□ 0.38
Hoxc9P09633 Gm37042-201ENSMUST00000193816 581 ntBASIC17.44■□□□□ 0.38
Hoxc9P09633 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC17.44■□□□□ 0.38
Hoxc9P09633 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc9P09633 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc9P09633 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc9P09633 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hoxc9P09633 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hoxc9P09633 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC17.43■□□□□ 0.38
Hoxc9P09633 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hoxc9P09633 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hoxc9P09633 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hoxc9P09633 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc9P09633 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxc9P09633 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxc9P09633 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC17.42■□□□□ 0.38
Hoxc9P09633 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Hoxc9P09633 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxc9P09633 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxc9P09633 Mir877-201ENSMUST00000104738 85 ntBASIC17.42■□□□□ 0.38
Hoxc9P09633 Gm24548-201ENSMUST00000158650 108 ntBASIC17.42■□□□□ 0.38
Hoxc9P09633 Gm37489-201ENSMUST00000191883 159 ntBASIC17.42■□□□□ 0.38
Hoxc9P09633 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxc9P09633 AC093022.1-201ENSMUST00000226949 1072 ntBASIC17.42■□□□□ 0.38
Hoxc9P09633 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Hoxc9P09633 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Hoxc9P09633 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxc9P09633 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Hoxc9P09633 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hoxc9P09633 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hoxc9P09633 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC17.41■□□□□ 0.38
Hoxc9P09633 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc9P09633 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC17.41■□□□□ 0.38
Hoxc9P09633 Gm5781-201ENSMUST00000219792 443 ntBASIC17.41■□□□□ 0.38
Hoxc9P09633 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms