Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Limk2O54785 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Limk2O54785 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Limk2O54785 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Limk2O54785 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Limk2O54785 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Limk2O54785 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Limk2O54785 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.76□□□□□ -0.21
Limk2O54785 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Limk2O54785 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.76□□□□□ -0.21
Limk2O54785 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Limk2O54785 Gm12485-201ENSMUST00000119641 291 ntBASIC13.76□□□□□ -0.21
Limk2O54785 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.76□□□□□ -0.21
Limk2O54785 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.76□□□□□ -0.21
Limk2O54785 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.76□□□□□ -0.21
Limk2O54785 Gm26464-201ENSMUST00000157094 305 ntBASIC13.76□□□□□ -0.21
Limk2O54785 Gm18307-201ENSMUST00000206864 949 ntBASIC13.76□□□□□ -0.21
Limk2O54785 Gm6007-201ENSMUST00000208170 823 ntBASIC13.76□□□□□ -0.21
Limk2O54785 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.76□□□□□ -0.21
Limk2O54785 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.76□□□□□ -0.21
Limk2O54785 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.76□□□□□ -0.21
Limk2O54785 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.76□□□□□ -0.21
Limk2O54785 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Gm24447-201ENSMUST00000083977 338 ntBASIC13.76□□□□□ -0.21
Limk2O54785 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Limk2O54785 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limk2O54785 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.76□□□□□ -0.21
Limk2O54785 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Limk2O54785 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Limk2O54785 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.75□□□□□ -0.21
Limk2O54785 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.75□□□□□ -0.21
Limk2O54785 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.75□□□□□ -0.21
Limk2O54785 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Limk2O54785 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.75□□□□□ -0.21
Limk2O54785 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Gm17330-201ENSMUST00000221047 165 ntBASIC13.75□□□□□ -0.21
Limk2O54785 Gm5161-201ENSMUST00000075243 853 ntBASIC13.75□□□□□ -0.21
Limk2O54785 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.75□□□□□ -0.21
Limk2O54785 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.75□□□□□ -0.21
Limk2O54785 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Limk2O54785 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Limk2O54785 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.75□□□□□ -0.21
Limk2O54785 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.74□□□□□ -0.21
Limk2O54785 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Limk2O54785 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Limk2O54785 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.74□□□□□ -0.21
Limk2O54785 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Limk2O54785 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Limk2O54785 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Limk2O54785 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms