Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.94□□□□□ -0.18
Trove2O08848 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trove2O08848 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Gm14822-201ENSMUST00000122247 291 ntBASIC13.94□□□□□ -0.18
Trove2O08848 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.94□□□□□ -0.18
Trove2O08848 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.94□□□□□ -0.18
Trove2O08848 Gm10275-202ENSMUST00000168697 495 ntBASIC13.94□□□□□ -0.18
Trove2O08848 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.94□□□□□ -0.18
Trove2O08848 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.94□□□□□ -0.18
Trove2O08848 Gm18889-201ENSMUST00000174284 929 ntBASIC13.94□□□□□ -0.18
Trove2O08848 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.94□□□□□ -0.18
Trove2O08848 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trove2O08848 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Trove2O08848 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Gm10275-201ENSMUST00000092620 635 ntBASIC13.94□□□□□ -0.18
Trove2O08848 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trove2O08848 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Trove2O08848 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.94□□□□□ -0.18
Trove2O08848 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trove2O08848 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trove2O08848 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Trove2O08848 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trove2O08848 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.93□□□□□ -0.18
Trove2O08848 Gm13365-201ENSMUST00000121188 973 ntBASIC13.93□□□□□ -0.18
Trove2O08848 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.93□□□□□ -0.18
Trove2O08848 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Trove2O08848 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.93□□□□□ -0.18
Trove2O08848 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.93□□□□□ -0.18
Trove2O08848 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trove2O08848 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trove2O08848 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.92□□□□□ -0.18
Trove2O08848 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.92□□□□□ -0.18
Trove2O08848 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.92□□□□□ -0.18
Trove2O08848 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.92□□□□□ -0.18
Trove2O08848 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Trove2O08848 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trove2O08848 Gm2756-201ENSMUST00000195851 400 ntBASIC13.92□□□□□ -0.18
Trove2O08848 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trove2O08848 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trove2O08848 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trove2O08848 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trove2O08848 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trove2O08848 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms