Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc112A0AUP1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc112A0AUP1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc112A0AUP1 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc112A0AUP1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Ccdc112A0AUP1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.52■□□□□ 0.07
Ccdc112A0AUP1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc112A0AUP1 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
Ccdc112A0AUP1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc112A0AUP1 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.52■□□□□ 0.07
Ccdc112A0AUP1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc112A0AUP1 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ccdc112A0AUP1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc112A0AUP1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Gm6912-201ENSMUST00000117218 544 ntBASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ccdc112A0AUP1 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Gm5425-201ENSMUST00000214125 459 ntBASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ccdc112A0AUP1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc112A0AUP1 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc112A0AUP1 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.49■□□□□ 0.07
Ccdc112A0AUP1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Ccdc112A0AUP1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc112A0AUP1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc112A0AUP1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc112A0AUP1 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc112A0AUP1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc112A0AUP1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.49■□□□□ 0.07
Ccdc112A0AUP1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms