Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Gm9899-201ENSMUST00000065519 555 ntBASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcb1Q9Z0H3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Gm27331-201ENSMUST00000183705 60 ntBASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcb1Q9Z0H3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Mir1938-201ENSMUST00000158746 100 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms