Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 AL138709.1-201ENST00000614840 1693 ntBASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 FRMD8P1-201ENST00000440433 1524 ntBASIC25.68■■□□□ 1.7
RIMBP3Q9UFD9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC25.67■■□□□ 1.7
RIMBP3Q9UFD9 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC25.67■■□□□ 1.7
RIMBP3Q9UFD9 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC25.67■■□□□ 1.7
RIMBP3Q9UFD9 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC25.67■■□□□ 1.7
RIMBP3Q9UFD9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
RIMBP3Q9UFD9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RIMBP3Q9UFD9 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
RIMBP3Q9UFD9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.67■■□□□ 1.7
RIMBP3Q9UFD9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC25.67■■□□□ 1.7
RIMBP3Q9UFD9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RIMBP3Q9UFD9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
RIMBP3Q9UFD9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
RIMBP3Q9UFD9 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC25.67■■□□□ 1.7
RIMBP3Q9UFD9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
RIMBP3Q9UFD9 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 AZGP1P1-201ENST00000411909 902 ntBASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 Z97180.1-201ENST00000445173 988 ntBASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 AL022344.2-201ENST00000568976 968 ntBASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 AC006453.4-201ENST00000636949 1252 ntBASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RIMBP3Q9UFD9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 AL023775.1-201ENST00000454907 1746 ntBASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 TEX30-203ENST00000376022 828 ntTSL 2 BASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 CRCP-204ENST00000398684 492 ntTSL 2 BASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 AC019193.1-201ENST00000506678 823 ntBASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 REXO1L8P-201ENST00000604378 1897 ntBASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RIMBP3Q9UFD9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 EEF1DP4-201ENST00000446006 880 ntBASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC25.64■■□□□ 1.7
RIMBP3Q9UFD9 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms