Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.96□□□□□ -0.02
Prpf40aQ9R1C7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Prpf40aQ9R1C7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Prpf40aQ9R1C7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Prpf40aQ9R1C7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Prpf40aQ9R1C7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Prpf40aQ9R1C7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Prpf40aQ9R1C7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Gm8927-201ENSMUST00000181978 981 ntBASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Gm44719-201ENSMUST00000206404 149 ntBASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Gm3222-201ENSMUST00000071282 990 ntBASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Mir497b-201ENSMUST00000093601 125 ntBASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf40aQ9R1C7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Gm15321-201ENSMUST00000121290 288 ntBASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Gm25925-201ENSMUST00000158314 306 ntBASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Gm21854-201ENSMUST00000179901 471 ntBASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40aQ9R1C7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40aQ9R1C7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40aQ9R1C7 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40aQ9R1C7 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40aQ9R1C7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40aQ9R1C7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40aQ9R1C7 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.93□□□□□ -0.02
Prpf40aQ9R1C7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40aQ9R1C7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40aQ9R1C7 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40aQ9R1C7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40aQ9R1C7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Prpf40aQ9R1C7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.93□□□□□ -0.02
Prpf40aQ9R1C7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40aQ9R1C7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms