Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Gm29667-201ENSMUST00000190817 490 ntBASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Gm44719-201ENSMUST00000206404 149 ntBASIC14.17□□□□□ -0.14
Cpne8Q9DC53 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.17□□□□□ -0.14
Cpne8Q9DC53 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Gm24420-201ENSMUST00000176676 59 ntBASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cpne8Q9DC53 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.15□□□□□ -0.14
Cpne8Q9DC53 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.15□□□□□ -0.14
Cpne8Q9DC53 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Gm5867-201ENSMUST00000063197 592 ntBASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms