Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Rps4l-201ENSMUST00000071745 943 ntBASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Hmg20aQ9DC33 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Hmg20aQ9DC33 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmg20aQ9DC33 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Gm4899-201ENSMUST00000178708 719 ntBASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Gm2445-201ENSMUST00000182798 989 ntBASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hmg20aQ9DC33 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms