Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Gm16026-204ENSMUST00000162652 683 ntBASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 CT030684.1-201ENSMUST00000227292 914 ntBASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 AC131710.1-201ENSMUST00000228336 990 ntBASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Mrpl55Q9CZ83 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Mir449b-201ENSMUST00000104833 80 ntBASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Gm14057-201ENSMUST00000120631 482 ntBASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Auts2-212ENSMUST00000178555 309 ntBASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Gm38225-201ENSMUST00000194001 393 ntBASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Gm20553-201ENSMUST00000204205 844 ntBASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 AC131187.1-201ENSMUST00000224567 809 ntBASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Gm18263-201ENSMUST00000220846 1928 ntBASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Mrpl55Q9CZ83 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.96
Mrpl55Q9CZ83 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC9.02□□□□□ -0.96
Mrpl55Q9CZ83 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Mrpl55Q9CZ83 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Mrpl55Q9CZ83 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Mrpl55Q9CZ83 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Mrpl55Q9CZ83 CT573086.2-201ENSMUST00000227277 4992 ntBASIC9.02□□□□□ -0.96
Mrpl55Q9CZ83 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Mrpl55Q9CZ83 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Mrpl55Q9CZ83 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms