Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TraipQ8VIG6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
TraipQ8VIG6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TraipQ8VIG6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TraipQ8VIG6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Gm12957-201ENSMUST00000117835 377 ntBASIC14.45□□□□□ -0.1
TraipQ8VIG6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TraipQ8VIG6 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Gm27514-201ENSMUST00000183692 110 ntBASIC14.45□□□□□ -0.1
TraipQ8VIG6 Gm37497-201ENSMUST00000195830 798 ntBASIC14.45□□□□□ -0.1
TraipQ8VIG6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.45□□□□□ -0.1
TraipQ8VIG6 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.45□□□□□ -0.1
TraipQ8VIG6 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TraipQ8VIG6 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.45□□□□□ -0.1
TraipQ8VIG6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Gm16372-201ENSMUST00000073088 450 ntBASIC14.45□□□□□ -0.1
TraipQ8VIG6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.45□□□□□ -0.1
TraipQ8VIG6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TraipQ8VIG6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Gm26927-201ENSMUST00000182385 965 ntBASIC14.44□□□□□ -0.1
TraipQ8VIG6 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TraipQ8VIG6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TraipQ8VIG6 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.43□□□□□ -0.1
TraipQ8VIG6 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Gm12203-201ENSMUST00000118235 598 ntBASIC14.43□□□□□ -0.1
TraipQ8VIG6 Gm12209-201ENSMUST00000120089 596 ntBASIC14.43□□□□□ -0.1
TraipQ8VIG6 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms