Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Snora78-201ENSMUST00000158630 128 ntBASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.16■□□□□ 0.02
Atp2a1Q8R429 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp2a1Q8R429 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.15■□□□□ 0.02
Atp2a1Q8R429 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp2a1Q8R429 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Gm12742-201ENSMUST00000117326 410 ntBASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atp2a1Q8R429 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atp2a1Q8R429 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atp2a1Q8R429 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atp2a1Q8R429 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Atp2a1Q8R429 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.13■□□□□ 0.01
Atp2a1Q8R429 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atp2a1Q8R429 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atp2a1Q8R429 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atp2a1Q8R429 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atp2a1Q8R429 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms