Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a6Q8C6K9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Gm11222-201ENSMUST00000119005 738 ntBASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Gm12997-201ENSMUST00000120207 640 ntBASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Gm20482-202ENSMUST00000174729 825 ntBASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Gm37922-201ENSMUST00000195596 455 ntBASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Gm17330-201ENSMUST00000221047 165 ntBASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.23□□□□□ -0.45
Col6a6Q8C6K9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Gm17376-201ENSMUST00000166016 84 ntBASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Gm10608-202ENSMUST00000213924 676 ntBASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Gm16372-201ENSMUST00000073088 450 ntBASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms