Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.18□□□□□ -0.14
Sh3rf3Q8C120 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf3Q8C120 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.18□□□□□ -0.14
Sh3rf3Q8C120 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf3Q8C120 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf3Q8C120 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf3Q8C120 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf3Q8C120 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.18□□□□□ -0.14
Sh3rf3Q8C120 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf3Q8C120 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf3Q8C120 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf3Q8C120 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sh3rf3Q8C120 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf3Q8C120 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.18□□□□□ -0.14
Sh3rf3Q8C120 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf3Q8C120 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf3Q8C120 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Syt7-204ENSMUST00000223586 1344 ntBASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Gm24420-201ENSMUST00000176676 59 ntBASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Gm17795-201ENSMUST00000214505 757 ntBASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sh3rf3Q8C120 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf3Q8C120 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf3Q8C120 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms