Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Shd-206ENSMUST00000225145 998 ntBASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne3Q8BT60 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cpne3Q8BT60 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cpne3Q8BT60 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cpne3Q8BT60 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Cpne3Q8BT60 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Gm14701-201ENSMUST00000117156 348 ntBASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Gm46209-201ENSMUST00000217912 553 ntBASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne3Q8BT60 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Gm15653-201ENSMUST00000119247 907 ntBASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Gm25948-201ENSMUST00000175334 112 ntBASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Gm43575-201ENSMUST00000196420 516 ntBASIC13.13□□□□□ -0.31
Cpne3Q8BT60 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms