Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Gm5434-202ENSMUST00000222384 1451 ntBASIC11.43□□□□□ -0.58
Rif1Q6PR54 Gm5434-201ENSMUST00000071825 1451 ntBASIC11.43□□□□□ -0.58
Rif1Q6PR54 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.43□□□□□ -0.58
Rif1Q6PR54 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.43□□□□□ -0.58
Rif1Q6PR54 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Gm8927-201ENSMUST00000181978 981 ntBASIC11.43□□□□□ -0.58
Rif1Q6PR54 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.43□□□□□ -0.58
Rif1Q6PR54 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.43□□□□□ -0.58
Rif1Q6PR54 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.43□□□□□ -0.58
Rif1Q6PR54 Gm5781-201ENSMUST00000219792 443 ntBASIC11.43□□□□□ -0.58
Rif1Q6PR54 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.43□□□□□ -0.58
Rif1Q6PR54 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Gm45550-201ENSMUST00000209380 946 ntBASIC11.43□□□□□ -0.58
Rif1Q6PR54 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Gm18027-201ENSMUST00000218947 619 ntBASIC11.43□□□□□ -0.58
Rif1Q6PR54 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rif1Q6PR54 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Gm43610-201ENSMUST00000199117 365 ntBASIC11.42□□□□□ -0.58
Rif1Q6PR54 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.42□□□□□ -0.58
Rif1Q6PR54 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rif1Q6PR54 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms